rs45891637 SNP Detail

Summary

• ID
  rs45891637
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:6622265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTCCAAC ACCTAATCTT
  TAAAAGAGCT TTTTTAAAGC ATTCACATAG TACTTTTAAA AACATGGACT GCTAGAAAAC
  AGTGCTGTGC AGCTGTCCTG TGGTAAGGAG TGACTTTTCT TCTGAAATGC CTTTTCAGTT
  GAACCAAAGA TGTGCCAGTT TGAAGGAAGC ACTCTCAGGC TTTGATGATG CAGATAGACA
  Y
  TCATGCTTAC GTGCTTAACG ATAAAAGGAG GAGGAGGAGG TGGGGCTACA AAAACAGGGT
  TTTTTTTCAA GCTCATTGCT GTATTTTTTT TTTAACCAGG AGACTTGTTT TAAGCTGTGA
  AGTTGATAAG TGGCCTTGTA GACATCTTAT GAACATCTAC CTATAAAATT GAAGTTGTAT
  TATAAAGATA AGTACATGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	PWD/PhJ
ss62614960	NES17310620	PERLEGEN	MM_PANEL2	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	PWD/PhJ
rs45891637					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62614960	NES17310620	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:6622265 () rs orientation: forward

Symbol	Name	Function Class
Fyb1	FYN binding protein 1	within coordinates
Rr498833	regulatory region 498833	within coordinates
Tssr130533	transcription start site region 130533	63 bp upstream
Tssr130534	transcription start site region 130534	95 bp upstream
Tssr133626	transcription start site region 133626	85 bp upstream