rs45900905 SNP Detail

Summary

• ID
  rs45900905
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:29191617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTACAGCCC AAGAAAGTGT CCTAGGCTGA CTGCTGGCTT
  GCTGTCTATC ATTTCAAGGC AGAGGGGGAT CTTTGGAGAC CGGGCTCCAC AGAGCTGAGT
  C
  CAAGAAAGCA AAGGGACGGG GCAAGTAAAT AATTGAGTCC CGCGTTTCCC TGAGCCACAG
  CCACGGGAAT CCCACTTCCA CACTGAGATG TGCGTGGAG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss137517944	ENSMUSSNP2941989	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323976324	CHEV_12_29826483	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs45900905					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:29191617 () rs orientation: forward

Symbol	Name	Function Class
Gm31333	predicted gene, 31333	311 bp upstream