rs45902479 SNP Detail

Summary

• ID
  rs45902479
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89039912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCATCTAAG TTTGGACCAT GATCATGTTT TATGTTATCT
  TCATCATAGT CTGTAAAGTG ATTTTAAATA TGACTCTCAA CATATGTTTC AAAAAAATGC
  R
  CACCATCAAA AACTAACTAA ATAAACTCTA TAAAATACTT TCTGTATATT CTGTGCTTTT
  GTCTTGGTCA CTTTTGAGGT GGTATCTGTG GGAAAGAGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148513999	ENSMUSSNP3266167	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss325272439	CHEV_16_89243269	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45902479					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89039912 () rs orientation: forward

Symbol	Name	Function Class
Gm35004	predicted gene, 35004	216 bp downstream