rs45903408 SNP Detail

Summary

• ID
  rs45903408
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118271488 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGT AAATGTGTTA AGTCAAAAAA
  M
  CAGGTAATAA TTATTCTGTG GTCCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147300488	ENSMUSSNP1810570	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A		C
ss320469567	CHEV_2_118266743	CHEVERUD	SCREENING_POP	f	SNP				C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs45903408					SNP	A	A	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118271488 () rs orientation: forward

Symbol	Name	Function Class
D2Mit276	DNA segment, Chr 2, Massachusetts Institute of Technology 276	1060 bp proximal
Eif2ak4	eukaryotic translation initiation factor 2 alpha kinase 4	within coordinates
Rr45942	regulatory region 45942	513 bp proximal