rs45909692 SNP Detail

Summary

• ID
  rs45909692
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121277015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCAGGTAT TGAGGGGAAA
  GAGCAGGACA GTCTAAGAAC ACTGTGTGCA GCCAAAGACA GACAACATAG TCTCAGCACA
  AGCAACTCAG AAGGTTTTAA ACTCAGGAGT AGCTATAGTT AAGAGTTAGC CAACACTGAA
  CTCATTTTTT TTTTTCTGAG ACAGGGTTTC TCTGTGTAGC CCTGGCTGTC CTGGAACTCA
  M
  TCTGTAGACC AGACTGGCCT TGAACTCAGA GATCCGCCTG CCTCTGCCTC CCGAGTGCTG
  GGATTAAAGG CGTGCTGCCA CCAATGCCTG GCTCTGAATT CATTTAAATA CTGCATGAAT
  ACTGAGCACC GGTATTAGAT CTACAAAATG AAACTGAGCG TTCCAAACCT CTGAAGTATG
  GAAATTGCAA AGTGGGCTAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss132911588	ENSMUSSNP861444	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45909692					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121277015 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4344	CpG island 4344	1340 bp proximal
Mir7236	microRNA 7236	956 bp downstream
Rab40b	Rab40B, member RAS oncogene family	within coordinates
Rr461969	regulatory region 461969	1777 bp proximal
Tssr112458	transcription start site region 112458	1997 bp downstream