rs45912950 SNP Detail

Summary

• ID
  rs45912950
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:99869152 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAAGGGGG ATGGCAGGAA
  GGAGATTGGC AGCCACTCTG ATCGGGAGTG GGTCCACCAC AAATCTGTTG GCCAGAAATC
  ATAACACACG AAGCTGATTT ACTGCTGCTC TTTAAAAAAC AGGGGGACTG GCAGGGAGCC
  ACAGGCTGGC AGATGAAGGA GATTATAGGC GTTGTTTGAC AGTGAAGTGG CTGGCAAGTG
  K
  GGGGCACACA GCAAGTTTGA CTGCAAAAGC ACATACAAGT TAATGGCTGG CAGGAGACAG
  ACATGCAGGG AGTTGACTGG CAGGACTTAA GAACATAGCA GATAGGTTGG TAATAAACTG
  ACTGACAGAG CTGACCTTCA CCTCTGGTGG GTTGATGTGA CCCGCCTTGG CAGCTGGTTG
  GTTGGCACGA GCCAGCCTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132715921	ENSMUSSNP3473032	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45912950					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:99869152 () rs orientation: forward

Symbol	Name	Function Class
Krtap29-1	keratin associated protein 29-1	within coordinates
Tssr110719	transcription start site region 110719	771 bp downstream