rs45914596 SNP Detail

Summary

• ID
  rs45914596
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:19958449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAGGCAC AGAAAATATC
  ATCAAAATCA TAGAAAAGTT TTCCAAACCT AAGACACATA CAAGCTTAAA GAACACAAAA
  TAGATTGAAC CAGAAAACAA AATCATATAG CCACATAATA ATTAATACAC TCACTGTATG
  GAACAAAGAA CACATATTAA AACTGCAAGG GAAAAAGGTC AGGCAACATA TAAAATGTAT
  W
  TATATATTTG AATTATACCT GGCCAGATGT CTTTTAGTCT CTAAGAGACA AAAGATGTCA
  CCCCAGATTA CTGCATACAC CCAAACATGC ACTCAACATA GATGGAGAAA AAAAAGATAT
  TCCACTAAAA AACAAAGTTA ATATCATTCC ATGAATCCAG ACCTATGGGG GATGCTAGAA
  GAAAGAAAAG ACTCCAACAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133058562	ENSMUSSNP6630791	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45914596					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:19958449 () rs orientation: forward

Symbol	Name	Function Class
Rr379021	regulatory region 379021	within coordinates