rs45930090 SNP Detail

Summary

• ID
  rs45930090
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127653076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTGTTTG GGAAGGATTA
  GGAGGTGAGG TGTGACCTTG TTGAAGTAAG ATTAAGAGGT GGCCTTGTTG GAGGAGGTGT
  GTTGGGGGTG AGCTCTAAAG TTTCAAAAGC CCGTGCCAGG CCCAGTCTCC TCTGTGTCTG
  CTGCCTGAGA TTCAGATGTA AACCTTTTGC TCAACTACTG CTCCCCCACT GTGCCTGTCT
  R
  CTTCCCACCA TGATAACCAT GGACCAACCT TCTAAAACCG TAGGCAAGCA CCGGATTCAA
  TGTTTTATTT TATAAGAATT TCCTGGGTCA CAGTGCTTCT TCACAGCAGT AGAACAAGAG
  CCAAGACAGA AATCAACGGG AAACTACACA AATCCAACCC TGGGAGGATG ACAAACAGCA
  GAGACCCTTC AGGAATGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135873302	ENSMUSSNP6433477	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45930090					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127653076 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Rr584887	regulatory region 584887	1971 bp proximal