rs45941489 SNP Detail

Summary

• ID
  rs45941489
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89340414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCC CCGAAAGCCA ACTTCTGGAT
  W
  GAGGCCTCTA CCTTTCCATA GATCG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147252788	ENSMUSSNP214770	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss323382120	CHEV_10_88967297	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45941489					SNP	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89340414 () rs orientation: forward

Symbol	Name	Function Class
Nr1h4	nuclear receptor subfamily 1, group H, member 4	within coordinates