rs45961150 SNP Detail

Summary

• ID
  rs45961150
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61561932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCTAAGGA GAATTATTTC CAAACAACAA TCTCATATCC
  AATCAAACTA TAAACCCACT TTGGTGACAG AACAGTGATC GTTTTCAGAT GTGAACGGTC
  W
  GCCTGCCTCC ATCTTTTTTT TTTTAAAGAC ACATTTATTC ATTTATTCAG CGTCATGATC
  AGACTATTAC ATTTAGCAAT CAACAGCATG GGTGAAAAAG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62418795	NES17249524	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	T	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45961150					SNP	A	A	A	T	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62418795	NES17249524	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61561932 () rs orientation: forward

Symbol	Name	Function Class
Gm5461	predicted gene 5461	369 bp downstream
Rr301285	regulatory region 301285	1170 bp distal
Tssr129059	transcription start site region 129059	1410 bp downstream