rs45961387 SNP Detail

Summary

• ID
  rs45961387
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:156555283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGAAGGCA AGAGAGCGGG CCTAACTAAC AGGACAAGCA
  CAGTCATGGC CCCACATAAG CAAATGTCCC ACTGGGGAAG GCAAGTCGGA TGACTGAGCT
  S
  GCAGTCAAGG ACGAGGGCTC TCCCACTCTT GCAGGGGAGA CTGTATCCCT GTGGCACAAG
  GCGTGTACAC AAGACGGCTG GAGATCGGTG GTAATCATT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148080916	ENSMUSSNP5333972	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
ss320581481	CHEV_2_156539099	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45961387					SNP	C	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156555283 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
4930405A21Rik	RIKEN cDNA 4930405A21 gene			1176 bp downstream
Dlgap4	DLG associated protein 4			Intron
				Noncoding-Transcript-Variant