rs45965227 SNP Detail

Summary

• ID
  rs45965227
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:21797656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAAGAATG GAAGGCAGCT GAAATACTTT GCTAGGAGAA
  TACTTCTTAC TGGAACTGTA GATTAACAAG GAAGTATTCT CCTAGCAAAG TATTTCCGGA
  T
  ATTTATAGAC CTGATACTGT AAAGATGCAG ATGAAGCCAT GTAAGTGTGG ACATAGCTGT
  AGTGATAATA TATTTTGAGC AATTTAACGT TCACAAGAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146353868	ENSMUSSNP1648444	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45965227					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21797656 () rs orientation: forward

Symbol	Name	Function Class
Gpr158	G protein-coupled receptor 158	within coordinates
Rr41903	regulatory region 41903	1945 bp proximal
Rr372895	regulatory region 372895	within coordinates