rs45982590 SNP Detail

Summary

• ID
  rs45982590
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51491360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCAGCATCC TGTGACCCCA GGACATTTAT TCTTAGGAAA
  CAGCAAGAAC ATATTTTCTT TTAACATTGC AAAAGAATTC AGACATCTGC CTGCCTCTGA
  G
  AAGCAGAGAT GGTAAACTAG CTAGGTGAGA CCTGAAATTT CTAGTCCTAA AATTAACATT
  TCTACTCCCA CTTAGGCCTT GACTTGTTGT GTCCCAGGC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139477908	ENSMUSSNP5700417	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss324622187	CHEV_14_51873578	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45982590					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51491360 () rs orientation: forward

Symbol	Name	Function Class
Gm62421	predicted gene, 62421	within coordinates
Rnase2a	ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)	1359 bp downstream
Tssr125425	transcription start site region 125425	18 bp downstream
Tssr128435	transcription start site region 128435	1843 bp downstream