rs45986727 SNP Detail

Summary

• ID
  rs45986727
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156555470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGACTGA GCTCGCAGTC
  AAGGACGAGG GCTCTCCCAC TCTTGCAGGG GAGACTGTAT CCCTGTGGCA CAAGGCGTGT
  ACACAAGACG GCTGGAGATC GGTGGTAATC ATTCAACCTG CTGCATCCCA CACATGTATT
  CATGCCTCGC TCACAGGGAA TGCTAAGCTA CCCAAGATCC CCCTAAGCGG CTGTGAGATA
  R
  GAGACAAGTC CTCGAGATTT CCTGAGAAAC GAACCTCGGA CCTTGCCTGC TTCCTTCCTA
  GGAACGCTAG ATTCATCTTC TTTAGCAGAA GCTGACTGAC CTAGCTCAAA CACGTTTTAT
  TTCATTATTC AATTTAATTT CATGTAGTTC TTTGTGCCAA GGTCACATGC ACAGTCACTT
  TGAGTCCCAC CCCCTTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148080946	ENSMUSSNP3629100	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45986727					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156555470 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	989 bp downstream
Dlgap4	DLG associated protein 4	within coordinates