rs45992865 SNP Detail

Summary

• ID
  rs45992865
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124019899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGACTAAAG CTTCAGCAAC
  TGAAGAGATG ACTCAGTGCT CAAGCAATTG TTCTTGCATA CGATCCAGGT TCCTCCCCAG
  GCACCCACAA AGTGGTTCAC AACCATCTGT AGCTAAAGTT CCACGGGATC AGGTGCCCTC
  TTCTGTCCAC TGTGGGCACT GCACACATGC AGTGCACAGA CATACACGCA GGCAATGCTC
  R
  TATTACACAT AGAATAAAAT AAACCTAAAA TAGAAGAAAA TTACAAAGAA TATAGCTTTA
  GTTTTCCCAT AACTTTACCA CAAAATAATA AGTTTAAATC ACATCTTCAT GAACAAATAC
  TTTCTTCTCA AACAAAAAGT CAGCATCTAT CATGATGAAT TTTGAATCAT ACTTGTGTTG
  GAGATAAGAA TATTAGCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135782604	ENSMUSSNP4854906	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45992865					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124019899 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	50 bp distal