rs45995357 SNP Detail

Summary

• ID
  rs45995357
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37693690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTCT TTCTGAAACT TTCATATTTC
  R
  CATGATCTGA ACTTTGCACT TTTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134809960	ENSMUSSNP5046838	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45995357					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37693690 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13100	CpG island 13100	140 bp proximal
Gm42922	predicted gene 42922	564 bp downstream
Rr575523	regulatory region 575523	within coordinates
Rr575524	regulatory region 575524	550 bp proximal
Rr575525	regulatory region 575525	1235 bp proximal
Rr575526	regulatory region 575526	1343 bp proximal
Spry1	sprouty RTK signaling antagonist 1	406 bp upstream
Tssr28908	transcription start site region 28908	123 bp upstream
Tssr28909	transcription start site region 28909	364 bp upstream
Tssr28910	transcription start site region 28910	387 bp upstream
Tssr28911	transcription start site region 28911	404 bp upstream
Tssr28912	transcription start site region 28912	444 bp upstream