rs46003454 SNP Detail

Summary

• ID
  rs46003454
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35222192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAGGCATT CATTTTTCAT
  GTATATATTC ATTCAACTTT TCAACTTAGC ATATGCCAGG CTCTGAACTG CCCCCGTACT
  CCACTGCTTA CTATATCCCA TGCTATAAGT ATACAAACGT GTTCAATGAA TACTTTGCTA
  ACCAAGATCT CACAGTCAGG TGAGTGCAAT AGACTACCAC ATGCCTGCCA ACAGATGTAA
  K
  TCATGTCAAG GTTCAAAAGT GGAAGGATAT ACAGCAGTAT GGTATAACAG CAACGGACAT
  TCACTGCATC CTTATGTCCC AGGTTCCATC TAAGGATCTC ACATTTGCTA ACTCACTCAA
  GAACCCAATG AACATAGACG AGGACCACCA AACTCAGTAG GAAGTGAGAA TCAGGTAACA
  GATAGATCAA GAGTAGGGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61379254	NES16759006	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G	T	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46003454					SNP	G	G	G	G	T	G	T	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61379254	NES16759006	PERLEGEN	MM_PANEL	f	SNP	G/T