rs46005637 SNP Detail

Summary

• ID
  rs46005637
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:96434416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACT GCTCACATCT TCCCTACCTA
  R
  CCCCCCCCCC AACCCCCATG TCCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132681476	ENSMUSSNP5603982	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46005637					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:96434416 () rs orientation: forward

Symbol	Name	Function Class
Rr252638	regulatory region 252638	within coordinates
Skap1	src family associated phosphoprotein 1	within coordinates
Tssr104542	transcription start site region 104542	1156 bp downstream
Tssr104543	transcription start site region 104543	1129 bp upstream
Tssr104544	transcription start site region 104544	1783 bp upstream
Tssr104545	transcription start site region 104545	1836 bp upstream
Tssr104546	transcription start site region 104546	1844 bp upstream
Tssr104547	transcription start site region 104547	1886 bp upstream
Tssr104548	transcription start site region 104548	1980 bp upstream
Tssr104549	transcription start site region 104549	1993 bp upstream