rs46007475 SNP Detail

Summary

• ID
  rs46007475
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:71961932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TATGCACTG TTTCTCTCCC CTTGACACCT
  TCATACCCCT CTGTCATGTG CCCCCGCCCC GTGTCACAGT GCCCCTTGGC AGAGTGAGGA
  CTCCCTCAGT AGTTCCACAC TCTACTCTTT GACAGTCGTC TCTTCTTTGC CCCAATCAAT
  R
  CACTCTCTCT TTATTCTTGA CCAAGTTCCC TAAAAGTCTA GGGCCTGAGG AAAGAACTCA
  TGACCCCGTG GATTCACACG TCCATATAAC CCTGATACTT TAGCAAATGC ATTCTTTTGT
  GTTGAAAACT GAGCATGGAG GGATGGATAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144647931	ENSMUSSNP5209965	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss319787550	CHEV_1_71969347	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46007475					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:71961932 () rs orientation: forward

Symbol	Name	Function Class
Gm70455	predicted gene, 70455	1801 bp downstream