rs46012850 SNP Detail

Summary

• ID
  rs46012850
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18119800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT ATTTTAGAAA GCTTTGTATT
  Y
  GTTCTCTGTG AATTTCACAT CATGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145228018	ENSMUSSNP5265034	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss325312431	CHEV_17_18036502	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46012850					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18119800 () rs orientation: forward

Symbol	Name	Function Class
Rr329600	regulatory region 329600	within coordinates
Rr336961	regulatory region 336961	within coordinates
Rr343850	regulatory region 343850	1067 bp proximal
Rr343851	regulatory region 343851	1226 bp proximal
Tssr142835	transcription start site region 142835	89 bp upstream