rs46026667 SNP Detail

Summary

• ID
  rs46026667
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27750410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TGGGGCCGGG CGGACCGCAA GTCTCAGGGG GCGTGGAGCC
  CAGGCGGAAG GGGCGGGCCG GGCACGAGAA GGGCTGGGCC GAGGTGCCGC GGGGTTGCTG
  G
  AGGGTCGTGG GCGGCGTGCA GGAGACATGT CGGCGGGCAG CAGCTGCAGC CAGACTCCCA
  GCCGGGCCAT CCCCACTCGC CGCGTAGCCC TCGGCGATGG C                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148886540	ENSMUSSNP7102256	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46026667					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27750410 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	within coordinates
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	within coordinates
Rr186444	regulatory region 186444	within coordinates
Tssr76776	transcription start site region 76776	50 bp downstream
Tssr76777	transcription start site region 76777	12 bp downstream
Tssr76778	transcription start site region 76778	13 bp upstream
Tssr76779	transcription start site region 76779	47 bp upstream
Tssr76780	transcription start site region 76780	115 bp upstream
Tssr76781	transcription start site region 76781	1041 bp upstream