rs46029117 SNP Detail

Summary

• ID
  rs46029117
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:30659357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTGGCGATGA GAAAGAATGG AAAAGAGAAA GGACCAGGGA
  AATGGCAGTG CCAAGGCTCT AGCCATCGTC TAAAAGAAAG ATACGGGAGA GAAGAAAGAG
  R
  AAGTCATACC TCAGTCAGGA CTCAGAGTGG CTGGCAAACC CAACCGAACC TCATGGTGGC
  ACTGTAGCAA CCACTTGGTT GATTGTTGGT TTGTTTTGGA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146399228	ENSMUSSNP366029	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46029117					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:30659357 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11452	CpG island 11452	1800 bp proximal
Rr554427	regulatory region 554427	within coordinates
Rr554428	regulatory region 554428	45 bp proximal
Rr554429	regulatory region 554429	1605 bp proximal