ATCCTCACAC TGGAGAAATG ACACAGCAAC AATTTAAATC TATATGAAAA AAATTTCTTT CAGTTTTCCA TTGTAAGCCA CTAAAGGCTA AAACATATGT CTTAACCAGT CCTGTTCAAT AACAGACAAG GAAAAGTTCT TTTCAGGAAA GGGTTTCCAC CTTTTTTGTT AAGGTTTGCT TAGGTACAGT TTGCAGATAG R TGAACTTGCT GGACTTCTGA TGCCAAGGGC AATATAATGC ATTTTTCAAA AGAAAAATTT TTTTTATTAG TCCTTTAAGA TGGAGGTGTA CCCTCTCAGA GGTGAAGGGG AGATGGGATG AGAGGAGGAA CCCTGTGAGG AGAGGCTTGG GGGGGGGGAG CAGCATTTGG GATGTAAATA CATAAATTAA ATTGAAGAAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss60435738 | NES15935097 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs46030306 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60435738 | NES15935097 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr3:116698940 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi13742 | CpG island 13742 | 832 bp proximal | ||||||
Frrs1 | ferric-chelate reductase 1 | mRNA-UTR | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr583800 | regulatory region 583800 | 791 bp distal | ||||||
Rr583801 | regulatory region 583801 | 1150 bp distal | ||||||
Rr583802 | regulatory region 583802 | 909 bp distal | ||||||
Rr583803 | regulatory region 583803 | 677 bp proximal | ||||||
Tssr31391 | transcription start site region 31391 | 1685 bp downstream | ||||||
Tssr31392 | transcription start site region 31392 | 1603 bp downstream | ||||||
Tssr31393 | transcription start site region 31393 | 1576 bp downstream | ||||||
Tssr31394 | transcription start site region 31394 | 1539 bp downstream | ||||||
Tssr31395 | transcription start site region 31395 | 893 bp downstream | ||||||
Tssr31396 | transcription start site region 31396 | 1082 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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