rs46030893 SNP Detail

Summary

• ID
  rs46030893
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:162955666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGACTGGGC ACCACAACTT AGCATTTTGA TTGGTTTTGG
  TTTTCTGTAG TAGTTCTATC TTTTACAAAG AGACATTTTA TTGGTGAGGG GTGAAAATTA
  S
  ACTTATCTGT GGGTATAAAA ATAAGTGTTT ATAGATTGGC ATTAGGGGTT ATGTTGGTTT
  AGTAAATTAG TGGTTGTAGA TTCTCCTCCA TAGCCACAA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145951685	ENSMUSSNP5834280	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46030893					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162955666 () rs orientation: forward

Symbol	Name	Function Class
Rr407202	regulatory region 407202	within coordinates
Rr422057	regulatory region 422057	1260 bp distal
Rr422058	regulatory region 422058	1158 bp proximal