rs46030907 SNP Detail

Summary

• ID
  rs46030907
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:131232245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCACCCGC TCCAGTGCCA
  GGGTCACAGA TGTGCTCAGC CACACCCTGC TTTTTACAGG AATGCTGGGG ATTTGAACTT
  AGGTCCTCAG GCTTGCATGG CAGGTACTTC ACCATGTGTG CCTGGCCCTG AGTATGCTTT
  CGAATGAGGG TTTTCTGAGA AGATTCAAGT TGGTTATCTA ATCAGCCAAG ATTCATAGGT
  R
  GTTCTAAGTT CCTGTTCTGA GCACCTCGCT GCCTACCCTG AAGCTTTTGG AGTTCTTTAA
  GGAAAGCCTC TTTAATTTTA ATTTACAAAA GTAGGTTATG TCGAGTGGGC TCCTGGAGAA
  GATACAAACA GGAATCTACA GTGGAATTAA TGATCCTCAA TTCCCCCACT TCATTCCATG
  CTGCCTCAAT GATCACTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61066479	NES16063193	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46030907					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61066479	NES16063193	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:131232245 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19823	CpG island 19823	1994 bp distal
Rr656477	regulatory region 656477	566 bp distal