rs46036112 SNP Detail

Summary

• ID
  rs46036112
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50583635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CCAGTTTTCT TCAGTTGAGA ATTCTTTGTT TAGCTCTGTA
  CCCCATCTTT TAATGGGCAT ATTTGATTTT CTGGAATCCA GCTTATAAAA TTGCCAAGCT
  C
  CTGTAAGGCA AAACACAGTG TCAATAAGAC AAAGAGGCCA CCAACAGATT GGGAAAGGAT
  TTTTACCAAC CCTAAAACTT ACAGGGGACT AATATCCATT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133182530	ENSMUSSNP2113132	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46036112					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50583635 () rs orientation: forward

Symbol	Name	Function Class
Gm4782	predicted gene 4782	1982 bp upstream
Rr379340	regulatory region 379340	541 bp upstream
Tssr56424	transcription start site region 56424	1765 bp upstream