rs46037470 SNP Detail

Summary

• ID
  rs46037470
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:87844268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTTAGA CCAGAACTAT
  GTATATAACC TAGTTATACT AAAGAGTCAT GAACCCTAAT CTACAAATTT ATGGATTGTC
  AATGTTGGAT GCCAGGAGAG GCCTTCTCTA GTCCTTCTTA GATACACACA AGCATTTTGA
  GATTGAGAGA TTCCTTCGCT CACTCATATC TCTTTAACAT TATCTTACAT GAATATTCTG
  Y
  TCACTATAAG ACAAAGGTCA CAGAGTTGTA ACCCAAGAAT CTCCCACACA GCCCTGGGTA
  CTACTATTCT CTCTGAGTTA CGAAGAATTA TAGCGAATCC AACGGAAGCT TTCTTTCCCC
  CAGCTTGTCT AATCTGAAGG CATGAGGAGA AATAAGAGTG CATTCCCTGC ATCCATTGCT
  GCTTTCTCAT TCATTTTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61301113	NES16909267	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46037470					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61301113	NES16909267	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:87844268 () rs orientation: forward

Symbol	Name	Function Class
Rr385070	regulatory region 385070	1512 bp upstream