rs46040191 SNP Detail

Summary

• ID
  rs46040191
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103134921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAT TGGCATCCTT AATGTTTAGG
  R
  TTTAGGGTGA CTCTCTGAAG CTGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss147131935	ENSMUSSNP762010	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46040191					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103134921 () rs orientation: forward

Symbol	Name	Function Class
Ehf	ets homologous factor	1301 bp upstream
Gm74896	predicted gene, 74896	242 bp downstream
Rr45517	regulatory region 45517	1279 bp proximal
Rr45518	regulatory region 45518	1679 bp proximal
Rr55313	regulatory region 55313	1320 bp distal
Tssr25460	transcription start site region 25460	1405 bp upstream
Tssr25461	transcription start site region 25461	1366 bp upstream