rs46041077 SNP Detail

Summary

• ID
  rs46041077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136856916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTC AGTCAAGAAA AATGTAGCTA
  Y
  CCCTAAAAAT TTCTCACTGT TCACC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135938711	ENSMUSSNP1238362	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320975033	CHEV_3_136814119	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46041077					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136856916 () rs orientation: forward

Symbol	Name	Function Class
Rr375787	regulatory region 375787	1568 bp upstream
Rr585922	regulatory region 585922	164 bp distal