rs46043616 SNP Detail

Summary

• ID
  rs46043616
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27719816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCGCCACA CTCAGTTATC CAAAGCTAAT GTTTGTCACC
  TTCCCCATGG TAAAGAGTTC TCATCCACTT GCTGGAGATT TCTTCATAAG AAACTAGAGT
  Y
  GAGGGAGTCA TGTGTCTGCA TGTGAACGTG TGGGTGCATC AGGTGTCTCC CTCTACTATT
  TTCCAGTTTA TTACCTTGAG ACAGGGTCTC TCACAGGGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148886214	ENSMUSSNP2459579	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46043616					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27719816 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	within coordinates
Cpgi20219	CpG island 20219	1275 bp distal
Gm45470	predicted gene 45470	1033 bp upstream
Rr661485	regulatory region 661485	1092 bp distal
Tssr80793	transcription start site region 80793	1747 bp upstream
Tssr80794	transcription start site region 80794	1559 bp upstream
Tssr80795	transcription start site region 80795	1269 bp upstream
Tssr80796	transcription start site region 80796	1232 bp upstream
Tssr80797	transcription start site region 80797	1201 bp upstream
Tssr80798	transcription start site region 80798	1017 bp downstream