rs46061106 SNP Detail

Summary

• ID
  rs46061106
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:48161440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGTTACA GAGTGCAATC
  CTGTCTCAAA GAGGGGCCAA GCTATTCAAC TTTAAGACCC GCCTCCAAGG ACTCCTGTCC
  TCTAGCAGTG AGGCTCCACC TCGTAGAGGT TTCGTAACTC CACAAAACAC GGGAGAGCAC
  TGTGTATGTA ACTGTTATGG CTACACAAAG TGCACACTAG CACTTGTGCC CTTAGCCATT
  K
  GTTCAGCTGT ACTTGGAGAG TACATTTACA ATTTTACTCA GCACCAAGTA TATTTAACAT
  CTATGAAACT AGAATCAAAC AACTGAGTTT AGCCACGGAG CAATTACAGC TTTACCATTT
  ACCTGGCGCC TTTAACAGTG ATACATGTAC TATCTACTAT GCTTCCAAAG TCTTGAAAAT
  CCCCAACAAC AGATTTCAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60606904	NES16304513	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46061106					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60606904	NES16304513	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:48161440 () rs orientation: forward

Symbol	Name	Function Class
Cdkn2aip	CDKN2A interacting protein	939 bp downstream
Gm64835	predicted gene, 64835	1478 bp upstream