rs46062098 SNP Detail

Summary

• ID
  rs46062098
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7261767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTTAAATTCT TTGAAGATCT GGCCAGCACA GTTCTTCAGG
  ATAAGCCTAG AGTCACATGA GCAGGGATAA GGTGTCTTGT GGAGCTTGTG TGACCCCTAG
  Y
  TTGCACAGAG TTTGTGGCTG TGGAGGGTGA TGTTGGAATA CTGTGTACTC CTGGAGAGGG
  AGCATGTGGA TAGCATGTAC CCAGGCCAGA AAAGAAGGAG A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145100585	ENSMUSSNP1778298	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46062098					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7261767 () rs orientation: forward

Symbol	Name	Function Class
Gm49721	predicted gene, 49721	within coordinates
Rnaset2b	ribonuclease T2B	within coordinates
Rr521500	regulatory region 521500	1225 bp proximal
Tssr146343	transcription start site region 146343	1103 bp upstream