rs46062844 SNP Detail

Summary

• ID
  rs46062844
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163436751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTATGTT TGTTGTATCG
  GTGTTTTGCT TGCATGAGTG TCTGTGCACT GTGCCCATGG AGGCCCAGAG AGGACATCAG
  AGCCGCTAAA ACTGGAGTTA CAGACAGTTG TGAGCTCCAC ATAGGTGGTG GGAAGGGAAC
  CTGTATCTTC TGTATGAGCA ACACGTGCTC TTAATTGTAG AACTCTCTCT CCAACCCTCG
  R
  TTTTTGTTTT GTTTCGTTTC ATTTTGTATT GTATTGTACT ATGTAGGTGC TGGAAATGCA
  AACTCAGGTC TTCATGTTGG CATAGTGAGC ACTTAGCCAA TGGCGGCATC TTCCCAGCCC
  ACACCTAAAA TCCCTTTTTT AAAAAATGTA TTCTGAAGCT GGGCAGTGGT GGCACATGCC
  TTTGGTCTCA GCACTCAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148206291	ENSMUSSNP468996	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46062844					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163436751 () rs orientation: forward

Symbol	Name	Function Class
Rr374198	regulatory region 374198	361 bp downstream
Rr569427	regulatory region 569427	475 bp distal
Rr569428	regulatory region 569428	199 bp proximal