rs46068801 SNP Detail

Summary

• ID
  rs46068801
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:154933265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCGTAAGGA TGGAGATCTC ACGATGCAGA AACCGGGGGG
  GGGGGGGCGT GAAAGGCATG GAGAAGGAGG GCCTAAAGCC CCAAGCAAAG GGGCTCCTCC
  C
  GGAGCCTGGA GCAGAGCTGG GAGCCCACCT GGGTCCTACA GGAGAAGCCT GCTGCTTGCC
  CCTACAGGAT GGGGACAAGG ATAAAACTGG TATCAGGGA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145774465	ENSMUSSNP1721576	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46068801					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154933265 () rs orientation: forward

Symbol	Name	Function Class
Gm29282	predicted gene 29282	340 bp upstream
Gm41980	predicted gene, 41980	within coordinates
Gm51651	predicted gene, 51651	within coordinates
Gm70900	predicted gene, 70900	1478 bp downstream
Gm71001	predicted gene, 71001	1860 bp downstream
Rr372279	regulatory region 372279	222 bp downstream