rs46071275 SNP Detail

Summary

• ID
  rs46071275
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191177906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCCGTCACG TCACGGTGGA AAGCCATGGC AGCAAGCAGT
  AGGCATGTGG AGCAGGAACG GAGAGCTTAC ATCATCATTC AAAAACAGGA GTCGGAGAGC
  A
  GAGTGGACAT AAGTAAGGTT TTAAACCCTC AAAGCCCACC CCTAATGGCT TACTTCCCCG
  AAGTGAGACC ATACTTCCTG AACGTCTTCA AACAGCTCT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320195298	CHEV_1_193269588	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46071275					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191177906 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	within coordinates
Rr372646	regulatory region 372646	within coordinates
Tssr15793	transcription start site region 15793	94 bp downstream