rs46071595 SNP Detail

Summary

• ID
  rs46071595
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83983636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGACAATC TTATTTCTAT
  CCACAGGTTC CCACAGTAGA AGGAGAGGCC TTACTCCTGA ACATTGTCCT CTGACTTTAC
  ACACATCACA CATGCACAAA CACATACATA CACACAGATT AGTAAAAATA TTTAAAAATA
  AGTATATCCT CTAGGCCAAC AGTTGACTGC TATGGCTATA AATAAATAAA TTAAATAGTG
  R
  TAAAACATCA GACTAAGAGA TCTCAAGTCT CTTAGCAACC TAGTAAGCTA AAAACCTGTT
  TTTGGACGAG AGAGGTGGCT CAGCTGTTAA GAGCACCTGC TGTTCTTGCA GAGGACCTGG
  GCTTAGTTGC CAGCATCCAC ATGACATTTG CAACCGTTCA TAACTCCTGA CCCAGGGGAT
  CTGATACCTC CTTTGATTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61663096	NES17611067	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46071595					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61663096	NES17611067	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83983636 () rs orientation: forward

Symbol	Name	Function Class
Gm31386	predicted gene, 31386	1889 bp downstream
Gm60518	predicted gene, 60518	369 bp downstream
Rr469522	regulatory region 469522	435 bp proximal
Rr469523	regulatory region 469523	897 bp proximal