rs46075216 SNP Detail

Summary

• ID
  rs46075216
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:10955722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCCTAAC CACAGAGCTG
  CATCCCAGAC CCACTTAGGA AACGTAAGCC CGGGACATAA ATCTTCTATG GACACAATAT
  ACACAACAGG GAATTAGTAC TATGAACTAT TTAAAAGTGT TTGTCCGTCA GCAAGTCCTG
  CAAGGGCTGG GGGCCTAGCT CAGTGAGAAG TGTTGGACAT AAAGGAGGTC ACTGGGTGCC
  M
  GGCTACATTG CTCTCCACCT GATTCCCTTA AAGAGTACCT CACCCAAACT AAGTGAGGCT
  GCTGGGATCT AAGCTCCAAC CGCCCTCTGT CCCTGCCCTT CCTATAGGCA AACATGTCTG
  GCTTTTCACA TGGATTTTGG AGGCTTGAAC TCAGGTCCTC ATGCCTGTCC AGTAAGTAGT
  GCTCAAACCT GCTGGATCAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	DBA/2J	PWD/PhJ
ss52594008	NES15689360	PERLEGEN	MM_PANEL2	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	DBA/2J	PWD/PhJ
rs46075216					SNP	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52594008	NES15689360	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:10955722 () rs orientation: forward

Symbol	Name	Function Class
D16Mit164	DNA segment, Chr 16, Massachusetts Institute of Technology 164	1834 bp proximal
Gm61125	predicted gene, 61125	within coordinates
Zc3h7a	zinc finger CCCH type containing 7 A	within coordinates