rs46084887 SNP Detail

Summary

• ID
  rs46084887
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78067107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAATCAA GACTCAGGAG
  TGGTGGTTTA GCCTGTAACC CTAGTGTAGT ACTCAAGTGG AGGCAGGAGT AATGCAAGTT
  TGAGGCCAGC CTGGGCTCCA TAGCAAGTTC AAGTCCAGCT TGAACTATAA CAGGATTCTA
  ACTCAAAAGA AAAAACAAAA CAAAACATGA AGAGGTTAGG AAAGTGAAGC CCTGGACTCA
  R
  TCCCCAGCAC CACAATCACA ACAATGAAAC AGCCTTAAAG AGAAAGACCC ATAAGCTAGG
  GGAGGCCACT GTTGATCAGT CTGCACTCCA GAACAGAGAG GCACTACTGC TGGAGCACCT
  ATTCAATCAC TCAAGCTCCT GAATTACAGG ACAAGTCCAG CCAAAACACA GAGCCTGTAC
  CTTCTCCATT CCATTGGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147176903	ENSMUSSNP2257731	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46084887					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78067107 () rs orientation: forward

Symbol	Name	Function Class
D10Mit139	DNA segment, Chr 10, Massachusetts Institute of Technology 139	1387 bp proximal
D10Mit139.1	DNA segment, Chr 10, Massachusetts Institute of Technology 139.1	1501 bp proximal
Trappc10	trafficking protein particle complex 10	within coordinates