rs46097367 SNP Detail

Summary

• ID
  rs46097367
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:66214376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGGTGTC TTTTGTCACG
  TGACAGGAAG CTGACTGACA CAGACTCTCA GTCGGCTACA AGCTCCAGAC ATATGCATGA
  AGTTATTGTG TACTCCCTCC TCCTCTCCTC TATCTCCCCC CCACCCTCCC GTTCTGGGCA
  CAGGGATAGA CTCTGAAGGC TTGAGAGCTG CCAGGAACCA GGAATGCTTC AAACTTGAGC
  Y
  GTTTCTGCCC CGCTAGAGCT ACGCTGGCTT CTAACCACTT CAAACACACA GTGGAGTGCC
  CAAAGCAATG TAACCTTGCT GGCTGTAGAA GTCTGCAAAA CCAGAGAAAA ACTGGAGTCA
  GCTGGCCTCA GAGATGGAGG ATCACACAAG AGGACACTCT ACAACCTAAG TCTACTTTCT
  ATAAGGTAGA ATTATATTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145842074	ENSMUSSNP6942524	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46097367					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:66214376 () rs orientation: forward

Symbol	Name	Function Class
Gm49871	predicted gene, 49871	within coordinates
Gm65032	predicted gene, 65032	within coordinates
Rr340106	regulatory region 340106	575 bp distal
Rr340107	regulatory region 340107	within coordinates