TCCATTAGCA TCCTCCTCTA GTAAGCCTGT ACCTAAACGT ATATGAAAGA TTAATTGGTT GGGATGTGAA ATCTGTGACT GCGGAATTCA GGAATCTTCT R ACTCCATTCT TCACACAAGC ACTGTGTTCA GGGGTCGGGC TGTGCAACCA TCCTGTATAA AGCAGTCATC ACTAAGAGCA AAGAGGCTAC TGGTTGGTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss135939673 | ENSMUSSNP2973519 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | A | ||
ss320975380 | CHEV_3_137002237 | CHEVERUD | SCREENING_POP | f | SNP | G | A | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs46098092 | SNP | G | G | A | G | A |
Location: Chr3:137045034 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Emcn | endomucin | 1790 bp upstream | ||||||
Rr585936 | regulatory region 585936 | 1514 bp proximal | ||||||
Tssr31897 | transcription start site region 31897 | 1759 bp upstream | ||||||
Tssr31898 | transcription start site region 31898 | 1803 bp upstream | ||||||
Tssr31899 | transcription start site region 31899 | 1830 bp upstream | ||||||
Tssr31900 | transcription start site region 31900 | 1874 bp upstream | ||||||
Tssr31901 | transcription start site region 31901 | 1906 bp upstream | ||||||
Tssr31902 | transcription start site region 31902 | 1939 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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