rs46104573 SNP Detail

Summary

• ID
  rs46104573
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78431100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTAGTTGC ATTTTTAGGG
  GTGTACCCCT CACCCATTCC TTTTAGGTAG TGCCGACATG CCCTGTTCCC TTATTGGGAA
  GGGATCTTTT AGCTGAGTGG GGAGTCTCTG TTTCCTTTGC TCCTCACATT CGCCTAAACC
  CAAGCTCATC AGCAGTTCCT CTGCTCCTCC TAGCCAGTCA GCCTACTAAC ACTAACATGT
  W
  GTTTCCTTTA CCAGCTTCTC AGGTGGACCC CCAAGTCTGG GACGTCCAGA ACCCTCTGTT
  GCTAAACACC ATTCTCCTGT TGTCATCCAG TTCCTGGACT CTACCAGGTA CATCACCCAA
  GCTCAATGCC CTCTCTCTCT CCAGAGCCTC AGGGGACTTA AGCCCATCAT TTCTGACTTC
  TTAAGGAAAA AACTCCTTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136668131	ENSMUSSNP723963	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46104573					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78431100 () rs orientation: forward

Symbol	Name	Function Class
Gm47430	predicted gene, 47430	1661 bp downstream
Gm69163	predicted gene, 69163	1201 bp upstream
Rr383643	regulatory region 383643	625 bp upstream