rs46109170 SNP Detail

Summary

• ID
  rs46109170
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8254082 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T ATCCCGTCCC GCGGGATTCA GTTATTCGTG GGTGCGAGGG
  GGACCGCGAA CCTGGAAGGA AATGGGAATA AAAGAAAGAA AAGTAGGAGG CCAGGAAGGG
  Y
  ACCTATCGAG GTCTCGTTTA TTAGGCTGAG GTGCCTTCTT TTTAAAGCAT ACATCGCAGG
  GAATATGGAA GGGGTCAAGG GAGAATTATA CAAAGAACAA A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145161467	ENSMUSSNP3598800	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46109170					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8254082 () rs orientation: reverse

Symbol	Name	Function Class
Adam22	a disintegrin and metallopeptidase domain 22	within coordinates
Gm55253	predicted gene, 55253	107 bp upstream