rs46126068 SNP Detail

Summary

• ID
  rs46126068
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:35934014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGGGCAGTA TGCCCTGAAA ATCCAGATAG CATCTTCCCT
  GAAAAGGCTT GATGCTGTTA CCATGGAGGG CACCCAGGCT TTCTCAGCCA AAGGGGATCC
  Y
  TCTGTCTTTT TTTTTTTCCT ACTAAAGCAG CGGTCTCTCA GATGGGGGTC TGAAGATTCT
  ATTTACACTA GTGACAAATT AGAACCACAC TGAAGGATC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss131955147	ENSMUSSNP1406689	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46126068					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:35934014 () rs orientation: forward

Symbol	Name	Function Class
D11Mit108	DNA segment, Chr 11, Massachusetts Institute of Technology 108	1258 bp distal
Rr243857	regulatory region 243857	1999 bp distal
Tenm2	teneurin transmembrane protein 2	within coordinates