rs46128293 SNP Detail

Summary

• ID
  rs46128293
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:71046938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGAGACCCCA CCTGACTTTT CTAAGAGGTC CATGACCAGG
  TGAGGATGGG TCTCCTTCAG AGCTTGGTAG AATAGGTCTT TGCAGGCTCG ACTCCAGGAC
  C
  GGCTGAGGTT GAAGAGCTTC CTCATCTTAT CTTGGTTTGT GTTCTCAGCC CGCACTGCCT
  CATAGGATTC TTCATTCAGC ACCAGACCAT GCAGCTTGTC C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss132382800	ENSMUSSNP5338481	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs46128293					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71046938 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nlrp1b	NLR family, pyrin domain containing 1B			Coding-NonSynonymous
				mRNA-UTR
				Noncoding-Transcript-Variant