rs46132757 SNP Detail

Summary

• ID
  rs46132757
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:51895086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTTCCCCT TGGGTCTATC TTCCGCTTCG TGTCACTTTC
  CCTTCCGGGT CAGGACCTCA GCAATTTCCA GTCTTGCGTA CTGTGCTCGG AACGCGGCAG
  K
  GCCCCGCCCT CACCCCGTTG CCAGGGCGTC CGGCTGCCCC GAGCCGGCAA GGTCGGCCAG
  GAGAGGAGGT GTGGTGTCCC GGGCCGGCTG GGACTTGCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132125426	ENSMUSSNP1839723	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
ss323669668	CHEV_11_51817761	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46132757					SNP	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:51895086 () rs orientation: forward

Symbol	Name	Function Class
Cdkl3	cyclin dependent kinase like 3	within coordinates
Cpgi2847	CpG island 2847	within coordinates
Rr246700	regulatory region 246700	within coordinates
Rr386068	regulatory region 386068	within coordinates
Tssr101304	transcription start site region 101304	42 bp downstream
Tssr101305	transcription start site region 101305	within coordinates
Tssr101306	transcription start site region 101306	54 bp upstream
Tssr101307	transcription start site region 101307	81 bp upstream