rs46137106 SNP Detail

Summary

• ID
  rs46137106
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69559998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCACACAG GTATCTCCGG TTAAGCATGT CAAACACCCG
  GCCAGGGGTA CCCACGATGA TATGGGGAGC TTCCATCTGC AGCTTCTGCA CCTCAGCACG
  S
  ACATTGGTGC CCCCAATGCA GGCATGACAA GAGGCACCCA TGTAGTCTCC TAATGCCATA
  ACCACCTTTT GTATCTGAAT GCAGAAGAAC ATCTACATT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132359937	ENSMUSSNP3784396	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46137106					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69559998 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3141	CpG island 3141	1744 bp proximal
Eif4a1	eukaryotic translation initiation factor 4A1	within coordinates
Gm22988	predicted gene, 22988	463 bp downstream
Gm24029	predicted gene, 24029	1196 bp upstream
Gm25835	predicted gene, 25835	177 bp upstream
Gm73992	predicted gene, 73992	293 bp downstream
Rr402674	regulatory region 402674	1995 bp upstream
Tssr108764	transcription start site region 108764	1917 bp upstream
Tssr108765	transcription start site region 108765	1786 bp upstream
Tssr108766	transcription start site region 108766	176 bp upstream