rs46143305 SNP Detail

Summary

• ID
  rs46143305
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121615136 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGACGTGA GTTTGAATCC CCAGACCCAG GTAACACAGC
  ACACGGTAGC ATGCCTATAA TCTGAGCACT CTTACTTCAG GATGGGAGAC AGAGACAGGA
  M
  AAATCCAGAA ACCCACCAGC CAGCTAGCCT GACAGACAGT AGAGGACAGA AAGGGGGAAA
  AGAAAAAATC CGTCCTGGCT CACACTAGGT AAACAAATG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135729804	ENSMUSSNP321949	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46143305					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121615136 () rs orientation: forward

Symbol	Name	Function Class
D3Mit347	DNA Segment, Chr 3 Massachusetts Institute of Technology 347	1578 bp proximal
Gm42776	predicted gene 42776	1957 bp downstream
Rr584177	regulatory region 584177	670 bp distal
Rr584178	regulatory region 584178	248 bp proximal