rs46143903 SNP Detail

Summary

• ID
  rs46143903
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83530323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AAAATTCTGT GAGCTGGCAA GGCAGCACCC CACACAGTAT
  TAGGAAGTAC TTTAATCTGA AAATGACAGG CCGAATACAA ATCAGATTTC AGTAAGCCTG
  R
  ACCTATGGCT CATTATAATA GAGAAATGAG TGGAGGACAA AGAGAGCTAG GTTACTTTCC
  AGAAAAACTA GAGGGAAGAA GACAAAATCC CCACTAACAG T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145197734	ENSMUSSNP3551038	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46143903					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83530323 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19376	CpG island 19376	1095 bp proximal
Gm74146	predicted gene, 74146	1796 bp upstream
Rr381056	regulatory region 381056	1030 bp downstream
Rr650491	regulatory region 650491	1807 bp distal
Rr650492	regulatory region 650492	1457 bp distal
Tlnrd1	talin rod domain containing 1	within coordinates
Tssr2320	transcription start site region 2320	1103 bp upstream