rs46144162 SNP Detail

Summary

• ID
  rs46144162
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12583424 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG ACACTTTTTC TTTGGAGTCA
  K
  CCACCACCTC TTACAGCCTT TCCAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss137142593	ENSMUSSNP5000992	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
ss323899606	CHEV_12_12540229	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46144162					SNP	T	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12583424 () rs orientation: forward

Symbol	Name	Function Class
Rr266588	regulatory region 266588	1625 bp distal
Rr266589	regulatory region 266589	1178 bp proximal
Rr386869	regulatory region 386869	1799 bp downstream