rs46145881 SNP Detail

Summary

• ID
  rs46145881
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:22701357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTA AATGTGAACT GTCTGTGGCT CTTACCCATC CATTCCAGAA ATACGGTTTT
  CTTGAAGGAA AGGATAGGTG TGTAAGATGA TTGAATTTAC AGACTAACAA AACTTTAAAC
  CTAAAAGGAG GGGAAAAGCT CTTAAAACTA TGAATTCTCT ACTACACTAA AATCCTATCA
  Y
  TTTGCTCACT GAGGCAGAAG GATCCCAAGT TCAAGGCTAG ATAGACAACA CAGTAATACT
  CTTGTACTCC TGAATCCAAT GTCTGATTTA CCAAAAATCC AAAAGATTTT AAATGTAACT
  TGTTAAACGT TATATTTACA ACTGTATATT TCCAGCAGAA TTTTGATGAG GACATCATCT
  GAGAAGCCAC ATAGAGAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146365998	ENSMUSSNP3172993	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46145881					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:22701357 () rs orientation: forward

Symbol	Name	Function Class
Apbb1ip	amyloid beta precursor protein binding family B member 1 interacting protein	within coordinates
Rr48488	regulatory region 48488	1957 bp distal
Rr48489	regulatory region 48489	within coordinates
Rr48490	regulatory region 48490	244 bp proximal
Rr372905	regulatory region 372905	within coordinates